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cambio label aggiunta organi

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ocrampal
2026-04-14 15:24:01 +02:00
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commit 549ba3cee3
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astrocyte/README.md
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hypothalamus/README.md
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neuron/axon.md
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@@ -2,26 +2,26 @@
Qui comprendiamo:
- BEH-AXO: Axon
- BEH-PRE: Presynapse
- BEH-VCGG: Voltage-Controlled Gated Channels
- AXON: Axon
- PRESYNAPSE: Presynapse
- VGCC-PRE: Voltage-Controlled Gated Channels
## BEH-AXO: Container
## AXON: Container
The axon does not contain specific behavior. We might add balancing of ATP within PRE later. Here we comprehend it as a “cable” transporting the AP from SOMA to Presynapse. It expands BEH-PRE which:
The axon does not contain specific behavior. We might add balancing of ATP within PRE later. Here we comprehend it as a “cable” transporting the AP from SOMA to Presynapse. It expands PRESYNAPSE which:
- can be developed by DEV-PRE
- the associations between BEH-PRE, BEH-POST e BEH-SYN is performed by the module that instantiate the Neurons and the Atrocytes, for example BEH-EXH or BEH-INH from winnertakeall.
- the associations between PRESYNAPSE, BEH-POST e BEH-SYN is performed by the module that instantiate the Neurons and the Atrocytes, for example BEH-EXH or BEH-INH from winnertakeall.
```Gen
container: BEH-AXO
container: AXON
expansion: BEH-PRE ( full: 50x, active: 0x, empty: 10x )
expansion: PRESYNAPSE ( full: 50x, active: 0x, empty: 10x )
# managed_by: BEH-EXH or BEH-INH from winnertakeall
# developed_by: DEV-AXO-BEH-PRE-TUB from DEV-N
# developed_by: DEV-AXO-PRESYNAPSE-TUB from DEV-N
```
## BEH-PRE: Container
## PRESYNAPSE: Container
**Discursive description**:
@@ -177,10 +177,9 @@ The simplification impies that:
---
```Gen
container: BEH-PRE
container: PRESYNAPSE
expansion: BEH-PRE-VGCC ( full: 10x, active: 5x, empty: 2x )
# tuned_by: TUN-PRE-VGCC from TUN.N
expansion: VGCC-PRE ( full: 10x, active: 5x, empty: 2x )
tub_local:
- Ca2+ ( full: 60x, active: 30x, empty: 0x )
@@ -204,7 +203,7 @@ container: BEH-PRE
```
### ms: behaviors PRE
### ms: behaviors
#### AP-RRPConcentration: Context
@@ -216,7 +215,7 @@ Questo poi per permettere la diversa contestualizzazione degli episodi di NTrele
```Gen
context: AP-RRPConcentration
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: AP
rf: ( active: 60x )
@@ -234,7 +233,7 @@ Qui controlliamo la concentrazione nel contesto di un AP.
```Gen
context: AP-Ca2+Concentration
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: AP
rf: ( active: 60x )
@@ -260,7 +259,7 @@ NT empty
```Gen
episode: NTreleaseMaximum
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: (Ca2+Full AND RRPFull)
rf: ( active: 3x ) # Maximum
@@ -276,7 +275,7 @@ Solo in questo caso NT modera! NT NOT empty
```Gen
episode: NTreleaseHigh
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: (Ca2+Full AND RRPFull)
rf: ( active: 6x ) # High
@@ -292,7 +291,7 @@ In tutti i casi di NT
```Gen
episode: NTreleaseMediumness
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: (Ca2+Full AND RRPMediumness) OR (Ca2+Mediumness AND RRPFull)
rf: ( active: 9x ) # Mediumness
@@ -308,7 +307,7 @@ In tutti i casi di NT
```Gen
episode: NTreleaseLow
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: (Ca2+Mediumness AND RRPMediumness)
rf: ( active: 12x ) # Low
@@ -334,7 +333,7 @@ Abbiamo il caso di clearance nel contesto di un AP e non nel contesto di AP, per
```Gen
episode: AP-CaClearanceHigh
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: Ca2+Full
rf: ( active: 3x ) # High
@@ -348,7 +347,7 @@ episode: AP-CaClearanceHigh
```Gen
episode: AP-CaClearanceMediumness
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: Ca2+Mediumness
rf: ( active: 6x ) # mediumness
@@ -362,7 +361,7 @@ episode: AP-CaClearanceMediumness
```Gen
episode: NotAP-CaClearance
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: NOT AP
rf: ( active: 24x ) # Low
@@ -384,7 +383,7 @@ The result is that Tr_Ca encodes not the instantaneous calcium level but the rec
```Gen
episode: CaTracesAccumulationFast
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: Ca2+Full
rf: ( active: 12x ) # fast
@@ -398,7 +397,7 @@ episode: CaTracesAccumulationFast
```Gen
episode: CaTracesAccumulationSlow
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: Ca2+Full
rf: ( active: 24x ) # Slow
@@ -408,7 +407,7 @@ episode: CaTracesAccumulationSlow
trace: None
```
### sec: behaviors PRE
### sec: behaviors
#### CheckConditionsPreSec: Context
@@ -416,7 +415,7 @@ Contestualizziamo in maniera Fixed ogni mezzo secondo?
```Gen
context: CheckConditionsPreSec
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: Fixed
rf: ( active: 600x )
@@ -431,7 +430,7 @@ context: CheckConditionsPreSec
out_context: eCBNotEmpty
```
#### eCB clearance
#### eCB clearance: Episode
eCB dipende da POST. Tende a modulare l'entrata di Ca2+ degli VGCC.
@@ -439,7 +438,7 @@ Qui non facciamo un flush di eCB, riduciamo ogni mezzo secondo (context) di un R
```Gen
episode: eCBClearance
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: eCBNotEmpty
rf: ( active: 24x ) # Slow
@@ -449,13 +448,13 @@ episode: eCBClearance
trace: None
```
#### CaTraces clearance
#### CaTraces clearance: Episode
Qui non facciamo un flush di Catrace, riduciamo ogni mezzo secondo (context) di un RF di questo episodio.
```Gen
episode: CaTracesClearance
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: CaTracesNotEmpty
rf: ( active: 24x ) # Slow
@@ -477,7 +476,7 @@ Rate: 0.00 – 0.25
```Gen
episode: RPShuttleSlow
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: RPShuttle
rf: ( active: 48x ) # Slow
@@ -495,7 +494,7 @@ Rate: 0.50 – 0.97
```Gen
episode: RPShuttleModerate
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: RPShuttle
rf: ( active: 24x ) # Slow
@@ -516,7 +515,7 @@ Rate: 1.25 – 1.94
```Gen
episode: RPShuttleFast
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: RPShuttle
rf: ( active: 12x ) # Fast
@@ -536,7 +535,7 @@ Rate: 2.50 – 5.00
```Gen
episode: RPShuttleMaximal
contained_by: BEH-PRE
contained_by: PRESYNAPSE
in_context: RPShuttle
rf: ( active: 6x ) # Maximal
@@ -546,7 +545,7 @@ episode: RPShuttleMaximal
trace: None
```
### min: behaviors PRE
### min: behaviors
#### Refill RP from Glutamine
@@ -578,19 +577,19 @@ Gln — depletes over bursts, refilled by glucose (slowest, astrocyte-depend
Each tier buys time for the one below it to respond. When all three are depleted simultaneously — which only happens under prolonged high-frequency firing with insufficient glucose — the synapse has no remaining buffer and goes silent until the minutes loop restores the Glutamine_pool.
#### TUN-PRE-VGCC: Tuner
#### VGCC-PRE-TUN: Tuner
```Gen
Tuner: TUN-PRE-VGCC
tuner: VGCC-PRE-TUN
contained_by: BEH-PRE
contained_by: PRESYNAPSE
tunes: BEH-PRE/expansion/BEH-PRE-VCGG
tunes: PRESYNAPSE/expansion/PRESYNAPSE-VCGG
tub_modulation: # in TUN agiamo su POS/ACT
- posMod ( fullness: None, active: BEH-PRE-VCGG/fullness, empty: 0x) # riferimento a possible di BEH-PRE-VCGG
- actMod ( fullness: None, active: BEH-PRE-VCGG/active, empty: BEH-PRE-VCGG/emptiness) # riferimento a active di BEH-PRE-VCGG
# qui stiamo modulando possible e actual di BEH-PRE-VCGG associandoli
- posMod ( fullness: None, active: PRESYNAPSE-VCGG/fullness, empty: 0x) # riferimento a possible di PRESYNAPSE-VCGG
- actMod ( fullness: None, active: PRESYNAPSE-VCGG/active, empty: PRESYNAPSE-VCGG/emptiness) # riferimento a active di PRESYNAPSE-VCGG
# qui stiamo modulando possible e actual di PRESYNAPSE-VCGG associandoli
# a posMod e actMod. Non serve associare una fullness perche'
# la modulazione e' una pompa fra posMod e actMod e controlliamo
# solo empty
@@ -607,7 +606,7 @@ Tuner: TUN-PRE-VGCC
```Gen
context: Check
contained_by: TUN-PRE-VGCC
contained_by: VGCC-PRE-TUN
in_context: TunPossible
rf: ( active: 60x )
@@ -620,7 +619,7 @@ context: Check
```Gen
episode: Tun
contained_by: TUN-PRE-VGCC
contained_by: VGCC-PRE-TUN
in_context: TunPreVcgg
rf: ( active: x )
@@ -630,21 +629,21 @@ episode: Tun
trace:
```
## BEH-PRE-VGCC: Container
## VGCC-PRE: Container
Voltage-Controlled Gated Channels: Qui per ora non gestiamo l'evoluzione della depolarizzazione. Alla scomparsa dell'AP, i VGCC smettono di funzionare.
```Gen
container: BEH-PRE-VGCC
container: VGCC-PRE
tub_intricated:
- Ca2+ ( contained_by: BEH-PRE )
- Ca2+ ( contained_by: PRESYNAPSE )
context_intricated:
- AP ( contained_by: BEH-SOMA )
```
### ms: behavior VGCC
### ms: behavior
#### Ca2+enter
@@ -670,7 +669,7 @@ Devo controllare che le condizioni sotto siano esaustive.
```Gen
episode: Ca2+enterOpen
contained_by: BEH-PRE-VGCC
contained_by: VGCC-PRE
in_context: AP
rf: ( active: 6x )
@@ -684,7 +683,7 @@ episode: Ca2+enterOpen
```Gen
episode: Ca2+enterReduced-partial
contained_by: BEH-PRE-VGCC
contained_by: VGCC-PRE
in_context: AP
rf: ( active: 6x )
@@ -698,7 +697,7 @@ episode: Ca2+enterReduced-partial
```Gen
episode: Ca2+enterSupressed
contained_by: BEH-PRE-VGCC
contained_by: VGCC-PRE
in_context: AP
rf: ( active: 6x )
tectum/README.md
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vertebrae/README.md
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winnertakeall/README.md
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