Update presynapse.md
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@@ -34,7 +34,7 @@ PRESYNAPSE
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// Context
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*AP: INTRICATION [ ref: &SOMA.*AP ]
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*TunePossible: INTRICATION [ ref: &NEURON.*TunePossible ]
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*TunPossible: INTRICATION [ ref: &NEURON.*TunPossible ]
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// Tub
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_NT: INTRICATION [ ref: &ASTROSYNAPSE._NT ]
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@@ -64,15 +64,15 @@ PRESYNAPSE
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# serve al DEV
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// Behaviour
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$: BEHAVIOUR [ behaviour: MAIN_PRE ]
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$: BEHAVIOUR [ behaviour: TUNE_PRE_VGCC ]
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$: BEHAVIOUR [ behaviour: DEV_PRE_TUBS ]
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$: BEHAVIOUR [ behaviour: MAIN ]
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$: BEHAVIOUR [ behaviour: TUN_VGCC ]
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$: BEHAVIOUR [ behaviour: DEV_TUBS ]
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```
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### !DAY | MAIN_PRE
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### !DAY | MAIN
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```Gen
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MAIN_PRE
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MAIN
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type: behaviour
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@@ -175,7 +175,7 @@ Serve a:
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- fare il tuning dei VGCC
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- dare la velocita' al trasporto di vesicles da RP a RRP, anche se non avendo ancora compreso \_ATP, la velocita' non cambia molto la sostanza.
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- le tracce vengono eliminate quando il neurone e' in pausa, lontano da uno spike train, *TunePossible
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- le tracce vengono eliminate quando il neurone e' in pausa, lontano da uno spike train, *TunPossible
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- Abbiamo 3 tracce, high, medium and low. Andiamo a verificare una combinazione di queste per fare la modulazione
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- RF e' a 10, questo dovrebbe essere un RF di campionamento durante *AP context che dovremmo assicurarci sia tipo 100. Il che implicherebbe 10 campionamenti.
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- The biological meaning is that a synapse that has just been through a burst is primed for fast recovery — the molecular machinery for vesicle docking is already engaged, calcium-dependent priming factors are still elevated, and the system is in a ready state. A synapse that has been silent for several seconds has cooled down and replenishes slowly.
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@@ -335,7 +335,7 @@ Qui facciamo un flush di CaTraceX. Deve essere fatto a valle del tuning.
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Ca2TracesClearance
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type: accumulator
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in_context: NOT *TunePossible
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in_context: NOT *TunPossible
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hypothesis: NOT _CaTraceHigh empty
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action: [ _CaTRaceHigh decrease ]
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@@ -350,10 +350,10 @@ Ca2TracesClearance
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trace: None
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```
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### !DAY | TUNE_PRE_VGCC
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### !DAY | TUN_VGCC
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```Gen
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TUNE_PRE_VGCC
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TUN_VGCC
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// qui stiamo attivando e disattivando PRE_VGCC. Fra un massimo full e minimo empty (empty puo' non essere 0)
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@@ -362,7 +362,7 @@ TUNE_PRE_VGCC
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snippet:
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// *TunePossible
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// *TunPossible
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@: CONTEXTOR [ snippet: VgccCheck, rf: active 60x ]
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// *VcggIncrease
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@@ -372,7 +372,7 @@ TUNE_PRE_VGCC
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@: ACCUMULATOR [ snippet: VcggDecrease, rf:active 10x ]
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```
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#### *TunePossible
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#### *TunPossible
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##### VgccCheck
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@@ -382,7 +382,7 @@ Qui controlliamo che ci siano le condizioni per aumentare o diminuire l'attivazi
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VgccCheck
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type contextor
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in_context: *TunePossible
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in_context: *TunPossible
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condition: _CaTraceHigh fullness
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out_context: *VcggIncrease
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@@ -421,11 +421,11 @@ VcggDecrease
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trace:
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```
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### !NIGHT | DEV_PRE_TUBS
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### !NIGHT | DEV_TUBS
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```Gen
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DEV_PRE_TUBS
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DEV_TUBS
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type: behaviour
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activity_scope: !NIGHT
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@@ -433,16 +433,16 @@ DEV_PRE_TUBS
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snippet:
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# *fixed
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@: CONTEXTOR [ snippet: Ca2PreDevCheck, rf: active 60x ]
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*Ca2PreFullDecrease
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@: ACCUMULATOR [ snippet: Ca2PreFullDecrease, rf: active 10x ]
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*Ca2PreFullIncrease
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@: ACCUMULATOR [ snippet: Ca2PreFullIncrease, rf: active 10x ]
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@: CONTEXTOR [ snippet: Ca2Check, rf: active 60x ]
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*CaFullDecrease
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@: ACCUMULATOR [ snippet: CaFullDecrease, rf: active 10x ]
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*Ca2FullIncrease
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@: ACCUMULATOR [ snippet: Ca2FullIncrease, rf: active 10x ]
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# *fixed
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@: CONTEXTOR [ snippet: RrpPreDevCheck, rf: active 60x ]
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*RrpPreFullDecrease
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@: ACCUMULATOR [ snippet: RrpPreFullDecrease, rf: active 10x ]
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@: CONTEXTOR [ snippet: RrpCheck, rf: active 60x ]
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*RrpFullDecrease
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@: ACCUMULATOR [ snippet: RrpFullDecrease, rf: active 10x ]
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*IncreaseRrpFull
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@: ACCUMULATOR [ snippet: IncreaseRrpFull, rf: active 10x ]
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@@ -450,50 +450,50 @@ DEV_PRE_TUBS
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#### *fixed
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##### Ca2PreDevCheck
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##### Ca2Check
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***Tens Milliseconds Time Scale***
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```Gen
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Ca2PreDevCheck
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Ca2Check
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type: contextor
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in_context: *fixed
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condition: ( empty )
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out_context: *Ca2PreFullDecrease
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out_context: *CaFullDecrease
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condition: ( full)
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out_context: *Ca2PreFullIncrease
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out_context: *Ca2FullIncrease
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```
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##### *Ca2PreFullDecrease
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##### *CaFullDecrease
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###### Ca2PreFullDecrease
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###### CaFullDecrease
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```Gen
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DecreasePreCa2Full
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type: accumulator
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in_context: *Ca2PreFullDecrease
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in_context: *CaFullDecrease
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hypothesis: NOT ( full ) AND NOT ( empty )
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action: [ increase, decrease]
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trace: None
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```
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##### *Ca2PreFullIncrease
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##### *Ca2FullIncrease
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###### Ca2PreFullIncrease
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###### Ca2FullIncrease
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```Gen
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IncreasePreCa2Full
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type: accumulator
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in_context: *Ca2PreFullIncrease
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in_context: *Ca2FullIncrease
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hypothesis: NOT ( full ) AND NOT ( empty )
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action: [ increase, decrease]
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@@ -502,50 +502,50 @@ IncreasePreCa2Full
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#### *fixed
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##### RrpPreDevCheck
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##### RrpCheck
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***Tens Milliseconds Time Scale***
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```Gen
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RrpPreDevCheck
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RrpCheck
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type: contextor
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in_context: *fixed
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condition: ( empty )
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out_context: *RrpPreFullDecrease
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out_context: *RrpFullDecrease
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condition: ( full)
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out_context: *IncreaseRrpFull
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```
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##### *RrpPreFullDecrease
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##### *RrpFullDecrease
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###### RrpPreFullDecrease
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###### RrpFullDecrease
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```Gen
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DecreasePreRrpFull
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type: accumulator
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in_context: *RrpPreFullDecrease
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in_context: *RrpFullDecrease
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hypothesis: NOT ( full ) AND NOT ( empty )
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action: [ increase, decrease]
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trace: None
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```
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##### *RrpPreFullIncrease
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##### *RrpFullIncrease
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###### RrpPreFullIncrease
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###### RrpFullIncrease
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```Gen
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RrpPreFullIncrease
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RrpFullIncrease
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type: accumulator
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in_context: *RrpPreFullIncrease
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in_context: *RrpFullIncrease
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hypothesis: NOT ( full ) AND NOT ( empty )
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action: [ increase, decrease]
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