Edit postsynapse.md
This commit is contained in:
Sergio Marchetti
+57
-108
@@ -44,36 +44,36 @@ POSTSYNAPSE
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bAP_ctx
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ms
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-- Ca Influx
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CaNDMAEnterMax: interacting
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CaNDMAEnterMed: interacting
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CaNDMAEnterMax: accumulator
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CaNDMAEnterMed: accumulator
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NOT bAP_ctx:
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ms
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-- Ca Influx
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CaNDMAEnterMedNotBap: interacting
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CaNDMAEnterLow: interacting
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CaNDMAEnterMedNotBap: accumulator
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CaNDMAEnterLow: accumulator
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-- Ca Clearence
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CaClearance: interacting
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CaClearance: accumulator
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-- V Influx
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VPostMax: interacting
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VPostMed: interacting
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VPostLow: interacting
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VPostMax: accumulator
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VPostMed: accumulator
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VPostLow: accumulator
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-- V Clearence
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VPostClearance: interacting
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VPostClearance: accumulator
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POST-AMPA
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NOT bAP_ctx
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ms
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-- Na Influx
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NaAMPAEnterMax: interacting
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NaAMPAEnterMed: interacting
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NaAMPAEnterMax: accumulator
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NaAMPAEnterMed: accumulator
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POST-NA-CLEAR
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NOT bAP_ctx
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ms
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-- Na Clearence
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NaClearanceHigh: interacting
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NaClearanceLow: interacting
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NaClearanceHigh: accumulator
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NaClearanceLow: accumulator
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```
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@@ -89,7 +89,9 @@ POSTSYNAPSE
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---
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```Gen
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container: POSTSYNAPSE
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POSTSYNAPSE
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type: container
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expansion:
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- POST-AMPA ( full: 10x, active: 5x, empty: 2x )
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@@ -108,138 +110,101 @@ container: POSTSYNAPSE
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- VPost ( contained_by: BD )
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context_intricated:
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- bAp ( contained_by: SOMA )
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- bAp_ctx ( contained_by: SOMA )
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```
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### ms: behaviors POST
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#### CheckNa: Contexting
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##### CaNDMAEnterMax: Accumulator
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```Gen
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context: CheckNa ## DA ELIMINARE ##
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contained_by: BEH-POST
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CaNDMAEnterMax: ( active: 2x )
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in_context: Fixed
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rf: ( active: 60x )
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condition: (Na fullness)
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out_context: NaMax
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condition: (Na mediumness)
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out_context: NaMedium
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condition: (Na emptiness)
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out_context: NaLow
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```
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##### CaNDMAEnterMax: Interacting
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```Gen
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interacting: CaNDMAEnterMax
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type: accumulator
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contained_by: POSTSYNAPSE
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in_context: bAp
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rf: ( active: 2x )
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in_context: bAp_ctx
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hypothesis: NOT (Ca2+ full) AND
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(Na fullness OR Na mediumness)
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action: [Ca2+ increase]
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trace:
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```
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##### CaNDMAEnterMed: Interacting
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##### CaNDMAEnterMed: Accumulator
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```Gen
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interacting: CaNDMAEnterMed
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CaNDMAEnterMed: ( active: 4x )
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type: accumulator
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contained_by: POSTSYNAPSE
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in_context: bAp
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rf: ( active: 4x )
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in_context: bAp_ctx
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hypothesis: NOT (Ca2+ full) AND (Na emptiness)
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action: [Ca2+ increase]
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trace:
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```
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##### CaNDMAEnterMedNotBap: Interacting
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##### CaNDMAEnterMedNotBap: Accumulator
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```Gen
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interacting: CaNDMAEnterMedNotBap
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CaNDMAEnterMedNotBap: ( active: 4x )
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type: accumulator
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contained_by: POSTSYNAPSE
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in_context: NOT bAP
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rf: ( active: 4x )
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in_context: NOT bAP_ctx
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hypothesis: NOT (Ca2+ full) AND (Na fullness)
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action: [Ca2+ increase]
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trace:
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```
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##### CaNDMAEnterLow: Interacting
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##### CaNDMAEnterLow: Accumulator
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```Gen
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interacting: CaNDMAEnterLow
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CaNDMAEnterLow: ( active: 12x )
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type: accumulator
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contained_by: POSTSYNAPSE
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in_context: NOT bAP
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rf: ( active: 12x )
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in_context: NOT bAP_ctx
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hypothesis: NOT (Ca2+ full) AND (Na mediumness)
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action: [Ca2+ increase]
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trace:
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```
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#### CaClearance: Interacting
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#### CaClearance: Accumulator
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```Gen
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interacting: CaClearance
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CaClearance: ( active: 24x ) # Low
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type: accumulator
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contained_by: POSTSYNAPSE
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in_context: NOT bAP
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rf: ( active: 24x ) # Low
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in_context: NOT bAP_ctx
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hypothesis: NOT (Ca2+ empty)
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action: [Ca2+ decrease]
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trace: None
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```
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#### CheckCaVPost:Contexting
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##### VPostMax: Accumulator
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Qui controlliamo il livello di Ca2+, che e' stato fatto entrare da NMDA, e creaiamo VPost nel DB. Abbiamo fatto una semplificazione, perche' il Ca2+ dovrebbe entrare nel DB in base a V_Post che fa aprire canali in DB. Invece creaimo direttamente il VPost.
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##### VPostMed: Accumulator
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```Gen
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context: CheckCaVPost ### DA ELIMINARE ###
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contained_by: BEH-POST
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##### VPostMin: Accumulator
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in_context: Fixed
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rf: ( active: 60x )
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condition: (Ca2+ fullness)
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out_context: CaMax
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condition: (Ca2+ mediumness)
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out_context: CaMedium
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condition: (Ca2+ emptiness)
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out_context: CaLow
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```
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##### VPostMax:Interacting
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##### VPostMed:Interacting
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##### VPostMin:Interacting
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##### VPostClearance:Interacting
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##### VPostClearance: Accumulator
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Il clearance lo facciamo qui nel container dove creaiamo anche i VPost, perche' altrimenti, se lo facessimo in DB, perderemmo l'aspetto temporale della contribuzione dei singoli POST.
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## POST-AMPA: Container
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```Gen
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container: POST-AMPA
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POST-AMPA
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type: container
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tub_intricated:
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- NT ( contained_by: SYNAPSE )
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@@ -250,45 +215,29 @@ container: POST-AMPA
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### ms: behaviors AMPA
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#### CheckNTPost: Contexting
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##### NaAMPAEnterMax: Accumulator
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```Gen
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context: CheckNTPost ### DA ELIMINARE ###
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NaAMPAEnterMax: ( active: 2x )
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type: accumulator
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contained_by: POST-AMPA
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in_context: NOT bAP_ctx
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rf: ( active: 8x )
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condition: (NT mediumness)
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out_context: NTMedium
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condition: (NT fullness)
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out_context: NTFull
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```
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##### NaAMPAEnterMax: Interacting
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```Gen
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interacting: NaAMPAEnterMax
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contained_by: POST-AMPA
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in_context: NOT bAP_ctx
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rf: ( active: 2x )
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hypothesis: (NT fullness)
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action: [Na increase]
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trace:
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```
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##### NaAMPAEnterMed: Interacting
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##### NaAMPAEnterMed: Accumulator
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```Gen
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interacting: NaAMPAEnterMed
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NaAMPAEnterMed: ( active: 4x )
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type: accumulator
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contained_by: POST-AMPA
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in_context: NOT bAP_ctx
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rf: ( active: 4x )
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hypothesis: (NT mediumness)
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action: [Na increase]
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trace:
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